Uses of Class
org.bioquery.query.Query

Packages that use Query
org.bioquery.gui Contains the Graphical User Interface (GUI) for the BioQuery application 
org.bioquery.query A complete framework for modeling, storing, and submitting queries to mutliple different databases. 
 

Uses of Query in org.bioquery.gui
 

Fields in org.bioquery.gui declared as Query
protected  Query QueryView.myQuery
           
 

Methods in org.bioquery.gui that return Query
 Query QueryView.getQuery()
           
 

Methods in org.bioquery.gui with parameters of type Query
 void ServerQueryManager.getQueryData(Query theQuery)
          Deprecated.  
 void ServerQueryManager.getQueryResults(Query theQuery, View receivingView)
          Deprecated.  
 void DefaultQueryView.initialize(Query query, BQFrame gui)
           
 void QueryManager.getQueryData(Query theQuery)
           
 void QueryManager.getQueryResults(Query theQuery, View receivingView)
           
 void LocalQueryManager.getQueryData(Query theQuery)
           
 void LocalQueryManager.getQueryResults(Query theQuery, View receivingView)
           
 

Uses of Query in org.bioquery.query
 

Fields in org.bioquery.query declared as Query
protected  Query QuerySubmitter.myQuery
           
 

Methods in org.bioquery.query that return Query
static Query QueryXmlConverter.readQuery(java.lang.Object source)
          This method reads an XML representation of a Query from the given source and returns a new Query object.
static Query QueryFactory.createQuery(java.lang.String database)
          Returns a Query object configured to build and submit searches to the specific database passed as the parameter.
 Query QueryLine.getQuery()
          Returns the Query that this QueryLine is part of.
 

Methods in org.bioquery.query with parameters of type Query
static void QueryXmlConverter.writeQuery(Query theQuery, java.lang.Object destination)
          This method writes the given Query to the destination as textual XML.
protected  void QuerySubmitter.setQuery(Query myQuery)
          Sets the Query object for this QuerySubmitter.
protected  java.lang.String NCBIQuerySubmitter.getFormatCode(Query theQuery)
          Deprecated in favor of the RETRIEVE_ADDRESS and query.fcgi script.
 

Constructors in org.bioquery.query with parameters of type Query
QueryLine(Query myQuery)
          Creates a QueryLine object with the next available line number associated with the given Query.
QueryLine(Query myQuery, int lineNumber)
          Creates a QueryLine object associated with the given Query at the given line number.
QueryLine(Query myQuery, java.lang.String text)
          Creates a QueryLine object with the next available line number associated with the given Query and containing the given query text.
QueryLine(Query myQuery, int lineNumber, java.lang.String text)
          Creates a QueryLine object associated with the given Query at the given line number and containing the given query text.